P u b l i s h i n g
Australasian
Plant Pathology
Volume 30, 2001
© Australasian Plant Pathology Society 2001
A journal for the publication of
original research in all branches of plant pathology
For editorial enquiries and manuscripts, please contact:
Australasian Plant Pathology
Editor-in-Chief
Dr Eric Cother
Orange Agricultural Institute
NSW Agriculture, Forest Road
Orange, NSW 2800, Australia
Telephone: +61 3 6391 3886
Fax: +61 3 6391 3899
Email: ric.cother@agric.nsw.gov.au
For general enquiries and subscriptions, please contact:
CSIRO Publishing
PO Box 1139 (150 Oxford St)
Collingwood, Vic. 3066, Australia
Telephone: +61 3 9662 7626
Fax: +61 3 9662 7611
Email: app@publish.csiro.au
Published by CSIRO Publishing
for the Australasian Plant Pathology Society
w w w. p u b l i s h . c s i ro . a u / j o u r n a l s / a p p
Australasian Plant Pathology, 2001, 30, 145–151
Leifsonia xyli-like bacteria are endophytes of grasses in eastern Australia
L. MillsAE, T. M. LeamanB, S. M. TaghaviA, L. ShackelA, B. C. DominiakC, P. W. J. TaylorD,
M. FeganB and D. S. TeakleA
A
Department of Microbiology and Parasitology, The University of Queensland, St Lucia,
Queensland 4072, Australia.
B
Cooperative Research Centre for Tropical Plant Protection, The University of Queensland, St Lucia,
Queensland 4072, Australia.
C
Bureau of Sugar Experiment Stations (BSES), Meiers Road, Indooroopilly, Queensland 4068, Australia;
present address: NSW Agriculture, 161 Kite Street, Orange, NSW 2800, Australia
D
Bureau of Sugar Experiment Stations (BSES), Meiers Road, Indooroopilly, Queensland 4068, Australia;
present address: Molecular Plant Genetics and Germplasm Development Group, Department of Crop Production,
The University of Melbourne, Parkville, Vic. 3010, Australia.
E
Corresponding author; email: kahlo@smartchat.net.au
Abstract. Bacteria serologically related to Leifsonia xyli ssp. xyli, the causal bacterium of ratoon stunting disease
(RSD) in sugarcane, were detected using the fluorescent antibody direct count on filter (FADCF) technique in
grasses in eastern Australia. In a survey of 191 grass, sedge and bullrush samples comprising 53 plant species, 90
(47%) of the samples tested harboured bacteria which reacted positively with L. xyli ssp. xyli polyclonal antiserum.
A total of 18 grass species was found to be naturally colonised with bacteria serologically related to and
morphologically similar to L. xyli ssp. xyli. Grasses colonised by these L. xyli-like bacteria were present in areas
both adjacent to, and removed from, sugarcane crops. When L. xyli-like bacteria from Rhodes grass (Chloris
gayana) were inoculated into sugarcane, they multiplied at a lower rate than L. xyli ssp. xyli. L. xyli-like bacteria in
Rhodes grass were isolated in axenic culture and exhibited growth rates, colony size and pigmentation similar to
those of L. xyli ssp. cynodontis, a bacterial pathogen of Cynodon dactylon (couch grass). Further, using a
polymerase chain reaction (PCR) test that could differentiate L. xyli spp. xyli from L. xyli spp. cynodontis, the
L. xyli-like bacteria infecting Rhodes grass, couch grass and panic grass (Panicum maximum) generated a product
of the same size as L. xyli spp. cynodontis. We conclude that L. xyli ssp. cynodontis or closely related bacteria are
common endophytes of grasses in eastern Australia.
Additional keywords: ratoon stunting disease, serology, PCR, Clavibacter.
Introduction
Leifsonia xyli subspecies xyli (Davis et al.) Evtushenko, a
coryneform bacterium (formerly of the genus Clavibacter,
Evtushenko et al. 2000), infects the xylem of sugarcane
(Saccharum interspecific hybrids) and causes ratoon stunting
disease (RSD; Gillaspie and Teakle 1989) in susceptible
sugarcane cultivars. Although sugarcane is the only known
natural host of the bacterium, L. xyli ssp. xyli has been
experimentally transmitted to 14 alternative hosts, namely
elephant grass (Pennisetum purpureum Schum.) (Matsuoka
1971; Steindl 1957), bana grass (P. purpureum × P. glaucum
(L.) R. Br.) (Steindl and Teakle 1974), maize (Zea mays L.)
(Steindl 1961), panic grass (Panicum maximum Jacq.), para
grass (Brachiaria mutica (Forsk.) Stapf), green summer
grass (B. milliformis (Presl) Chase), barnyard grass
(Echinochloa colonum (L.) Link), blady grass (Imperata
cylindrica (L.) Beauv.), red Natal grass (Rhynchelytrum
© Australasian Plant Pathology Society 2001
repens (Willd.) C.E. Hubbard), Parramatta grass
(Sporobolus capensis (Willd.) Kunth), wild sorghum
(Sorghum verticilliflorum (Steud.) Stapf) (Steindl 1957),
Sudan grass (Sorghum drummondii (Steud.) Millsp. &
Chase), Johnson grass (Sorghum halepense (L.) Pers.) (Liao
and Chen 1981) and couch grass (Cynodon dactylon (L.)
Pers.) (Liao and Chen 1981). These inoculated hosts
remained symptomless.
A related bacterium, L. xyli ssp. cynodontis, occurs in,
and causes stunting of, Cynodon dactylon (Liao and Chen
1981; Davis et al. 1984). This bacterium has been
mechanically transmitted to Sudan grass (Liao and Chen
1981) and maize (Barbehenn and Purcell 1993). L. xyli sspp.
xyli and cynodontis share some common cell surface
antigens and both react with polyclonal antiserum produced
against L. xyli ssp. xyli. They can be distinguished by their
higher pathogenicity to their natural hosts, their different
10.1071/AP01003
0815-3191/01/020145
146
L. Mills et al.
Table 1.
Details of bacterial strains used in this study
Bacterial species
Leifsonia xyli ssp. xyli
L. xyli ssp. cynodontis
Clavibacter michiganensis ssp. michiganensis
C. michiganensis ssp. insidiosus
C. michiganensis ssp. nebraskensis
Rathayibacter rathayi
R. tritici
L. xyli-like
L. xyli-like
Strain designation
T
ACM 2272/L1A
TB1AB
ACM 4950C
ACM 4951
ACM 4952
ACM 4954
ACM 3998
Clone 9
Clone 102
Source
Reactivity with antiserumA
Sugarcane
Couch grass
Tomato
Lucerne
Corn
Cocksfoot grass
Wheat
Rhodes grass
Rhodes grass
+
+
–
–
–
–
–
+
+
A
An antiserum to L. xyli ssp. xyli ACM 2272/L1A was used in FADCF tests.
Type strain.
C
ACM = Australian Collection of Microorganisms, Department of Microbiology and Parasitology, The University of
Queensland, St Lucia, Queensland 4072.
B
colony characteristics and growth rates on sugarcane (SC)
agar (Davis et al. 1983) and by a polymerase chain reaction
(PCR) test (Fegan et al. 1998).
Despite the implementation of RSD control measures,
some Australian sugarcane farmers are unable to eradicate
the disease from their crops. Dominiak et al. (1992)
concluded that there might be previously undetected routes
of infection, such as transmission from L. xyli ssp.
xyli-infected grasses during harvesting of sugarcane fields.
This paper reports a survey of grasses in eastern Australia to
determine if they were naturally infected by L. xyli ssp. xyli
or related bacteria.
Methods
Bacterial cultures
Reference and type strains of L. xyli and related bacteria were
received from the Australian Collection of Microorganisms (ACM),
The University of Queensland, Australia. In addition, L. xyli-like
bacteria were isolated from Rhodes grass (Chloris gayana) in
Queensland. Details of these bacterial strains are given in Table 1.
L. xyli ssp. xyli and L. xyli ssp. cynodontis were maintained on modified
sugarcane agar (MSC) (Croft et al. 1993). C. michiganensis and
Rathayibacter spp. were maintained on 523M agar (Riley and Ophel
1992). All cultures were incubated at 28°C.
Production of polyclonal antiserum against L. xyli ssp. xyli
Antigen production
L. xyli ssp. xyli (ACM2271) isolated from sugarcane cultivar Q110
was suspended in 3 mL of sterile saline. The suspension was
centrifuged at 15 000 rpm for 5 min and the pellet was washed and
resuspended in 1.5 mL PBS (8 g NaCl, 0.2 g KH 2PO4, 2.9 g
Na2HPO4.12H2O, 0.2 g KCl, 1 L deionised water, pH 7.4). To the
suspension, 1.5 mL of Freund’s incomplete adjuvant was added and the
mixture emulsified. A 1 mL volume of the emulsion was injected into
the thigh muscle of a rabbit. This injection of freshly prepared bacterial
suspension was repeated at fortnightly intervals for 3 months using a
freshly prepared bacterial suspension each time.
Determination of antiserum titre
Approximately 3–5 mL of blood was collected at weekly intervals
and stored overnight at 4°C to allow clotting. The serum was separated
from the clot by centrifugation at 15 000 rpm for 5 min and the serum
was subjected to two-fold dilutions in PBS. A drop of each serum
dilution was transferred to a Petri dish and mixed with a drop of
concentrated suspension of L. xyli ssp. xyli in PBS. Following a 1 h
incubation at room temperature, the Petri dish was placed under a stereo
microscope and each of the drops examined for agglutination. The
highest dilution of serum at which agglutination occurred was
considered to be the titre. After 12 weeks the rabbit was bled out when
a titre greater than 1:1000 was reached.
Purification of immunoglobulin G (IgG)
Twenty mL of blood was collected 8 weeks following the initial
injection and was centrifuged at 15 000 rpm for 5 min. The serum
fraction was withdrawn, diluted 1:10 with sterile deionised water, and
50 mL of saturated ammonium sulfate (76.2 g / 100 mL deionised
water) was added and the solution stirred for 45 min at room
temperature. The precipitate was collected by centrifugation at 12 000
rpm for 10 min and dissolved in 10 mL of PBS. The suspension was
dialysed twice in 1.5 L of half strength PBS overnight. IgG was
separated from the other immunoglobulins by elution through a DEAEcellulose column with PBS. Eluted fractions were collected in
microfuge tubes and absorbances were determined spectrophotometrically at 280 nm. The approximate IgG concentration was
calculated using the formula 1 mg mL–1 IgG = 1.4 absorbance units.
Fractions with absorbances greater than 0.5 were retained.
Conjugation of IgG with fluorescein isothiocyanate (FITC)
The procedure followed was that of Davis and Dean (1984).
Specificity of the L. xyli ssp. xyli polyclonal antiserum using the
fluorescent antibody direct count on filter (FADCF) technique
Bacterial isolates tested included L. xyli ssp. xyli (ACM2272/L1A –
type strain), L. xyli ssp. cynodontis (TB1A – type strain),
C. michiganensis sspp. michiganensis (ACM4950), insidiosus
(ACM4951), and nebraskensis (ACM4952), Rathayibacter rathayi
(ACM4954) and R. tritici (ACM3998). A loopful of culture of each
bacterium to be tested was suspended in 500 µL of PBS and centrifuged
at 15 000 rpm for 2 min. The pellet was resuspended in 200 µL of PBS,
5 µL of FITC-conjugated IgG was added and the suspension was
incubated in the dark at 28°C for 30 min. The suspension was diluted in
2 mL of PBS and passed through a 0.2 µm filter membrane (Gelman
Sciences, USA). Bacteria were deposited on the membrane and
fluorescent-labelled bacteria were detected with PL Fluotar 100×
objective on a Leitz Laborlux S microscope with a blue light illumination
Liefsonia xyli-like bacteria in grasses
Table 2.
147
Grass species in south-east Queensland and northern New South Wales harbouring bacteria serologically related to
Leifsonia xyli ssp. xyli as determined by the fluorescent antibody direct count on filter (FADCF) technique
Host
Brachiaria decumbens Stapf (signal grass)
Chloris gayana Kunth (Rhodes grass)
Chloris virgata Sw. (feathertop Rhodes grass)
Cynodon dactylon (L.) Pers. (couch grass)
Cynodon plectyostachyum Pilger (African star grass)
Echinochloa colonum (L.) Link (awnless barnyard grass)
Eleusine indica (L.) Gaertn. (crowsfoot grass)
Eragrostis sp. (love grass)
Eragrostis cilianensis (All.) Link ex Lutati (stink grass)
Imperata cylindrica (L.) Beauv. (blady grass)
Melinus minutiflora P. Beauv. (molasses grass)
Panicum maximum Jacq. var. trichoglume Eyles ex Robyns
(panic grass)
Paspalum dilatatum Poir. (paspalum)
Paspalum urvillei Steud. (Vasey grass)
Rhynchelytrum repens (Willd.) C.E. Hubb.
(red Natal grass)
Setaria gracilis Beauv. (pale pigeon grass)
Sorghum verticilliflorum (Steud.) Stapf (wild sorghum)
Sporobolus caroli Mez (fairy grass)
Locality
Number of colonised plants per
number sampled
Brisbane (Qld)
Blue knob (NSW)
Brisbane (Qld)
Bundaberg (Qld)
Chuwar (NSW)
Gympie (Qld)
Kholo Creek (NSW)
Kilcoy (Qld)
Kunghur (NSW)
Mt. Glorious (Qld)
North Maclean (Qld)
Tumblegum (NSW)
Wivenhoe (Qld)
Delungra (NSW)
Brisbane (Qld)
Chinderah (NSW)
Bundaberg (Qld)
Bundaberg (Qld)
Brisbane (Qld)
Bundaberg (Qld)
Bundaberg (Qld)
Bundaberg (Qld)
Bundaberg (Qld)
Chinderah (NSW)
Cudgen (NSW)
Cudgen (NSW)
Tweed Valley (NSW)
Cudgen (NSW)
1/1
1/1
6/11
7/11
1/1
4/5
1/1
1/1
1/1
1/1
8/12
1/1
2/2
3/4
3/6
3/3
1/4
3/6
1/1
4/5
2/3
1/1
3/4
1/1
1/1
1/1
1/1
6/6
Brisbane (Qld)
Bundaberg (Qld)
Brisbane (Qld)
Mt. Glorious (Qld)
Brisbane (Qld)
2/4
3/4
3/3
1/1
1/1
Bundaberg (Qld)
Brisbane (Qld)
Tweed Valley (NSW)
Gympie (Qld)
1/2
1/2
1/1
2/2
(12 filter block) (Ernst Leitz Ltd., Germany). A strong uniform
fluorescence of cells was deemed a positive reaction with the antiserum.
centrifuged at 12 000 rpm for 5 min. The pellet was resuspended in
200 µL of PBS.
Serological detection of Leifsonia xyli-like bacteria in plants
Inoculation of sugarcane setts
Extraction of bacteria from plants
Sources of inoculum
Grasses, sedges and a bullrush from locations in south-east
Queensland and north-east New South Wales were sampled. Plants
were removed from the soil with their roots intact. Soil and debris were
removed from stalks by washing under running water. Stalks were cut
into approximately 5 mm pieces, placed in a 25 mL bottle and
immersed in PBS/Azide (500 mL PBS / 0.1 g NaN 3) for 2 h. A 1.5 mL
portion of the suspension was transferred to a microfuge tube and
Rhodes grass (Chloris gayana) clones 9 and 102 were maintained
in a glasshouse at about 25°C and were watered regularly. Each pot was
elevated and isolated to prevent cross contamination during irrigation
and manipulations. The grasses were shown by FADCF to be infected
with L. xyli-like bacteria. Stalks (approximately 200 g) of each clone
were cut aseptically into 5–10 mm-long pieces. The cut pieces were
added to 500 mL of sterile deionised water and the suspension was kept
148
at room temperature for 2 h. The liquid portion of the suspension was
decanted and retained.
Sugarcane cultivar Q110 known to be infected with L. xyli ssp. xyli
was maintained at the BSES Pathology Farm, Brisbane. Five stalks
were pressed to express the juice and the extract was diluted 1:1 with
sterile deionised water. FADCF was used to determine the presence
of L. xyli ssp. xyli in the extract. The initial inoculum concentration
of L. xyli ssp. xyli and L. xyli-like bacteria was approximately
105 cells/ mL.
Source of soil and RSD-free sugarcane Twenty stalks of
apparently healthy sugarcane variety Q110, maintained at the BSES
Pathology Farm, Brisbane, were steam treated at 52°C for 4–5 h
(a treatment designed to cure plants of L. xyli ssp. xyli infection;
Gillaspie and Teakle 1989). Single node setts were cut using alcoholsterilised cutters. Fibrovascular sap of heated sugarcane stalks was
extracted under positive pressure (Croft and Witherspoon 1982) and
found by FADCF to be free of L. xyli ssp. xyli. Approximately 100 kg
of soil from the BSES Pathology Farm was crudely sieved to remove
large pieces of organic matter and steam treated at 52°C for 3 h.
L. Mills et al.
reacted with L. xyli ssp. xyli cells and exhibited crossreactivity with L. xyli ssp. cynodontis cells. The antiserum did
not react using FADCF with cells of C. michiganensis subspp.
michiganensis, insidiosus and nebraskensis, Rathayibacter
tritici or R. rathayi.
PCR for the differentiation of L. xyli ssp. xyli and ssp. cynodontis
A PCR assay used to distinguish L. xyli ssp. xyli from ssp.
cynodontis (Fegan et al. 1998) was used to amplify DNA from L. xylilike isolates obtained from Rhodes grass. The PCR reaction contained
three primers: a conserved forward primer which would anneal to either
ssp. xyli or ssp. cynodontis, and two reverse primers which were specific
for either ssp. xyli or ssp. cynodontis. The type strains for L. xyli sspp.
xyli (ACM2272/L1A) and cynodontis (TB1A) were used as positive
controls. The PCR test was also used in conjunction with the FADCF
technique to test for the presence of L. xyli ssp. cynodontis in a total of
17 extracts obtained from eight grass species.
Presence and geographical location of plants harbouring
L. xyli ssp. xyli
In a survey of 191 grass, sedge and bullrush samples
obtained from 53 plant species, 90 of the samples harboured
bacteria that reacted positively using FADCF with L. xyli ssp.
xyli polyclonal antiserum. A total of 18 grass species of the
family Poaceae was found to be naturally colonised with
bacteria serologically related to, and morphologically similar
to, L. xyli ssp. xyli . The colonised grass species and the
localities from which they were obtained are shown in Table 2.
Grass, bullrush and sedge species which did not harbour
a natural population of L. xyli-like bacteria were Andropogon
gerardii Vitm. (big bluestem), Axonopus compressus
P. Beauv. (broadleaf carpet grass), Bothriochloa ewartiana
(Domin) C.E. Hubb. (desert blue grass), Bothriochloa
insculpta (Hochst. ex A. Rich.) A. Camus cv. Bisset
(creeping blue grass), Brachiaria miliiformis (Presl) Chase
(green summer grass), Bromus diandrus Roth (great brome),
Capillipedium spicigerum S.T. Blake (scented top),
Cenchrus ciliaris L. (buffel grass), Cyperus brevifolius
(Rottb.) Haask. (Mullumbimby couch), C. difformis L. (rice
weed), C. rotundus L. (nut grass), Dicanthium aristatum
(Poiret) C.E. Hubb. (Angelton grass), Digitaria ciliaris
(Retz.) Koeler (summer grass), D. parviflora (R. Br.) Hughes
(small flower finger grass), D. sanguinalis (L.) Scop. (crab
grass), Hemarthria altissima (Poir) Stapf & C.E. Hubb.
(limpo grass), Heteropogon contortus (L.) P. Beauv. ex
Roem. and Schult. (black speargrass), Panicum antidotale
Retz. (blue panic grass), Paspalum nicorae Parodi
(Brunswick grass), P. notatum Hugge cv. Competidor (Bahia
grass), Pennisetum clandestinum Hochst. ex Chiov. (kikuyu),
P. glaucum (L.) Pers. (pearl millet), Setaria anceps Stapf
(setaria), Sorghastrum nutans (L.) Nash cv. Lometa (yellow
Indian grass), Sorghum halepense (L.) Pers. (Johnson grass),
Sporobolus pyramidalis P. Beauv. var. pyramidalis (giant rats
tail grass), Typha sp. (bullrush), Urochloa mosambicensis
(Hack.) Dandy (sabi grass), U. panicoides P. Beauv. var.
panicoides (liverweed grass) and Vetiveria zizanioides (L.)
Nash (Vetiver grass). It was noted that the size of the pellet
obtained from diffusates of these plants was significantly
smaller than that of Rhodes grass and thus the population of
L. xyli-like bacteria, if present, may have been below the
level of detection of the FADCF technique.
Results
Specificity of L. xyli ssp. xyli polyclonal antiserum
Polyclonal antiserum with a homologous agglutination titre
of 1:1430 against L. xyli ssp. xyli was produced 3 months after
the first injection. Using the FADCF technique, the antiserum
Infection in sugarcane
Five months after inoculation of sugarcane setts with
L. xyli ssp. xyli from sugarcane, fluorescent cells resembling
those of this bacterium were detected in fibrovascular
extracts of all eight stalks tested. At this time, no fluorescent
Inoculation of sugarcane uprights
Pots (190 × 210 mm) were washed, rinsed with 70% ethyl alcohol
and filled with steamed soil to a depth of approximately 170 mm. Both
cut ends of 20 healthy Q110 single-node setts were sprayed until
saturated with the appropriate inoculum and the setts incubated for 1 h.
The setts were then planted horizontally in the pots with the nodal bud
uppermost, with four pots containing five single node setts per
treatment. A control treatment was also included in which the setts were
left untreated. The pots were maintained in a glasshouse at about 25°C.
Two stalks from each pot were sampled at 5 and 8 months following
inoculation. Fibrovascular extract was extracted via positive pressure
from these stalks and the FADCF technique was used to detect L. xyli
ssp. xyli and L. xyli-like bacteria. The extract was deemed positive if one
or more bacteria per field were observed in ten microscope fields. The
remaining fifth stalk from each pot was sliced longitudinally after
8 months to determine if vascular discoloration had occurred.
In vitro isolation of L. xyli-like bacteria
Rhodes grass cultivars 9 and 102 which harboured L. xyli-like
bacteria were maintained in a glasshouse at about 25°C. Stalks were
washed in tap water, blotted dry and cut into pieces 50–60 mm in
length. The stalk pieces were immersed in 5% (w/v) sodium
hypochlorite and 10% (v/v) Tween 20 for 5 min and rinsed in sterile
deionised water. Approximately 10 mm was cut aseptically off a piece
from one end and discarded. The sap was expressed from the remaining
tissue directly onto MSC agar plates and incubated at 28°C.
Liefsonia xyli-like bacteria in grasses
Table 3.
149
The number of stalks infected, and the average concentration of fluorescent Leifsonia xyli-like bacteria in extracts,
8 months post-inoculation of sugarcane Q110 with L. xyli ssp. xyli or L. xyli-like bacteria.
No. stalks infected
Sugarcane juice extract
Rhodes grass clone 9 extract
Rhodes grass clone 102 extract
Control — untreated
Av. conc. bacteria/mL No. stalks infected
8/8
0/8
0/8
0/8
3.4 × 108
0
0
0
8/8
4/8
3/8
0/8
Av. conc. bacteria/mL
4.7 × 108
1.2 × 106
0.9 × 106
0
A
The extracts from sugarcane (containing L. xyli ssp. xyli) and Rhodes grass (L. xyli-like bacteria) each contained approx.
105 cells/mL
bacteria were detected in sugarcane inoculated with the
L. xyli-like bacteria from Rhodes grass or in the
uninoculated controls (Table 3).
Eight months after inoculation with L. xyli ssp. xyli,
fluorescent cells resembling those of this bacterium were
again detected in 8/8 stalks of sugarcane examined (100%
colonisation). However, fluorescent bacteria were also seen
in 4/8 and 3/8 sugarcane stalks inoculated with L. xyli-like
bacteria from Rhodes grass clone 9 and clone 102,
respectively. The fluorescent bacteria were more numerous
(approx. 108 cells/mL) in the extracts of infected sugarcane
inoculated with L. xyli ssp. xyli than those inoculated,
with the L. xyli-like bacteria from Rhodes grass (approx.
106 cells/mL; Table 3).
The typical RSD symptoms of a red/orange discoloration
of the vascular bundles in nodes of mature stalks, were not
apparent when sugarcane inoculated with either L. xyli ssp.
xyli or the L. xyli-like bacteria from Rhodes grass was
examined after 8 months.
In vitro isolation of L. xyli-like bacteria
Six L. xyli-like isolates were obtained in pure culture on
MSC agar from six Rhodes grass clones of cultivars Pioneer,
Topcut or Finecut. The bacteria grew aerobically on MSC agar,
producing colonies of approximately 0.5–1 mm diameter in 3–5
days. Colonies were circular with entire margins, were convex
and developed yellow pigmentation. Isolation of L. xyli-like
bacteria from other grasses was unsuccessful.
Identification of L. xyli-like bacteria using PCR
The six L. xyli-like strains obtained from Rhodes grass
produced a 446 bp amplification product specific for L. xyli
ssp. cynodontis (not shown). L. xyli-like bacteria were also
detected using both PCR and FADCF in the fibrovascular
extract of nine samples of Rhodes grass from which isolates
were not obtained and in xylem exudate from Cynodon
dactylon (couch grass) and Panicum maximum (panic grass).
Discussion
The only reported natural host of L. xyli ssp. xyli is
sugarcane and the bacterium can be transmitted from
diseased to healthy stalks on harvesting equipment (Hughes
and Steindl 1955; Taylor et al. 1988). Despite its narrow host
range in nature, the RSD bacterium has been shown to infect
14 grass species under experimental conditions (Steindl
1957; Liao and Chen 1981). Dominiak et al. (1992)
suggested that grasses are undetected reservoirs of the RSD
bacterium and that the bacterium might be transmitted to
sugarcane during harvesting. To investigate this possibility
we surveyed selected plants in subtropical eastern Australia.
The survey of grasses, sedges and a bullrush in south-east
Queensland and northern New South Wales using FADCF
revealed that, out of 191 samples tested, 90 were positive for
bacteria which were serologically and morphologically
related to L. xyli ssp. xyli. A total of 18 grass species of the
family Poaceae harboured natural populations of L. xyli-like
bacteria (Table 2). These grasses were widely distributed in
subcoastal areas. Grasses colonised by L. xyli-like bacteria
were present in areas both near to, and remote from,
commercial sugarcane cultivation areas. For instance,
infected Eleusine indica and Paspalum dilatatum plants were
found in the Brisbane area, in addition to growing adjacent
to sugarcane fields in Bundaberg. Since L. xyli-like infected
grasses were not exclusively found in sugarcane regions,
there was no evidence that the colonised grasses were always
being infected from sugarcane.
At 5 months post-inoculation, infectivity studies
demonstrated that L. xyli-like bacteria from Rhodes grass
were not detected in sugarcane cultivar Q110, and they had
increased to only approximately 106 cells/mL of extract at
8 months. Since the limit of sensitivity of the FADCF
technique is 104–105 cells/mL, it is assumed that after
5 months the population of L. xyli-like bacteria in sugarcane
was below the threshold of detection. In contrast, L. xyli ssp.
xyli had multiplied in sugarcane to approximately 108 cells/
mL of extract after 5 months. In addition, while L. xyli ssp.
xyli colonised 100% of inoculated sugarcane setts, L. xylilike bacteria from Rhodes grass clones 9 and 102 were
detected in only 50% and 37.5% of setts, respectively.
While L. xyli ssp. xyli is able to infect non-natural hosts,
these infections occur at a lower efficiency and give rise to
lower bacterial yields when compared to infections of natural
hosts. Davis et al. (1983) observed that L. xyli ssp. xyli did
not readily multiply within Cynodon dactylon and Liao and
Chen (1981) reported that L. xyli ssp. cynodontis colonised
only 22% of Sudan grass-sorghum hybrids, while L. xyli ssp.
150
xyli infected 92% of the plants. It can thus be inferred from
this that the L. xyli-like bacteria isolated from Chloris
gayana are probably not L. xyli ssp. xyli based on their
inability to colonise, and propagate within, sugarcane
vascular tissue to the corresponding level exhibited by L. xyli
ssp. xyli.
While the presence of vascular discoloration in mature
nodes of sugarcane has been used to diagnose L. xyli ssp. xyli
infection (Hughes and Steindl 1955; Steindl and Teakle
1974; Taylor et al. 1988; Gillaspie and Teakle, 1989), no
discoloration or other symptoms of disease were observed in
this study. Others have reported asymptomatic infection of
sugarcane (Steindl 1961), and discoloration is known to vary
among sugarcane clones (Gillaspie and Teakle 1989). It was
expected that the susceptible Q110 cultivar used in this study
would exhibit symptoms of disease. However, RSD is
notably a disease that is observed during adverse growing
conditions in the field. These conditions may not have been
represented under the experimental conditions used in this
study. Thus the lack of observable symptoms precludes the
determination of the pathogenic role of L. xyli-like bacteria
in RSD of sugarcane.
Davis et al. (1988a) reported symptomatic colonisation of
sugarcane with bacterial yields of 8.5 × 108 cells/mL from a
mature internode, which is similar to the yields achieved in
this study (4.7 × 108 cells/mL). The level of colonisation
within sugarcane cultivars has also been shown to be an
indicator of yield loss (Koike et al. 1982; Davis et al. 1988b).
Therefore, the failure of the L. xyli-like bacteria from Rhodes
grass to multiply to the level seen in L. xyli ssp. xyli-infected
sugarcane cultivar Q110 suggests the L. xyli-like bacteria
may be less pathogenic to sugarcane than L. xyli ssp. xyli.
Isolates of L. xyli-like bacteria from Rhodes grass in
axenic culture exhibited growth rates and colony size and
pigmentation similar to L. xyli ssp. cynodontis. L. xyli-like
isolates from Rhodes grass generated a PCR product the
same size as L. xyli ssp. cynodontis, using a PCR test that can
differentiate L. xyli ssp. xyli from ssp. cynodontis (Fegan et
al. 1998). Due to the difficulties associated with isolating
these fastidious, slow growing bacteria from plants, isolates
were not obtained from grasses other than Rhodes grass. It
was observed that Rhodes grass harboured a larger
population of L. xyli-like bacteria than the other grasses
examined and this may have contributed to the relative ease
of isolation of these bacteria.
As isolates could be obtained only from Rhodes grass,
extracts of other grasses were subjected to PCR tests. L. xylilike bacteria were detected by PCR (producing a product the
same size as that produced by L. xyli ssp. cynodontis) in
Rhodes grass (Chloris gayana), couch grass (Cynodon
dactylon) and panic grass (Panicum maximum). The
observation that Rhodes grass harboured a larger population
L. Mills et al.
of L. xyli-like bacteria than other grasses may have also
contributed to the low number of grasses that tested positive
by PCR. The number of bacteria present in other grasses may
have been below the limit of detection of the PCR test used
(104 cells/mL; Fegan et al. 1998).
We have shown that L. xyli-like bacteria naturally infected
some plants of Rhodes grass (Chloris gayana), couch grass
(Cynodon dactylon) and panic grass (Panicum maximum) in
eastern Australia. L. xyli-like bacteria were present,
sometimes in low numbers, in 15 other grasses in eastern
Australia. The significance of these endophytes in the health
and productivity of their host grasses in Australia remains to
be determined.
It is possible that these L. xyli-like bacteria could be
mechanically transmitted from their grass hosts to sugarcane
during harvesting operations. If the results of our inoculation
test with the Rhodes grass isolates are applicable to isolates
from other grasses, they are unlikely to cause significant
disease in sugarcane. However, their cross-reactivity with
L. xyli ssp. xyli antiserum in routine screening for RSD in
sugarcane could conceivably result in false positive
diagnoses.
The exact identity of the L. xyli-like bacteria from Rhodes
grass and other grasses in eastern Australia has not yet been
determined. Although at least some resemble L. xyli ssp.
cynodontis in having a faster growth rate and a yellower
colony type on MSC agar than L. xyli ssp. xyli, further
phenotypic and pathogenicity tests are needed to support
evidence of similarity with L. xyli ssp. cynodontis provided
by the PCR tests.
Acknowledgements
The authors thank the Queensland Bureau of Sugar
Experiment Stations for their financial assistance. We are
grateful to Mr Don Loch of the Queensland Department of
Primary Industries for supplying grasses, including Rhodes
grass clones 9 and 102.
References
Barbehenn RV, Purcell AH (1993) Factors limiting the transmission of
a xylem-inhabiting bacterium Clavibacter xyli subsp. cynodontis to
grasses by insects. Phytopathology 83, 859–863.
Croft BJ, Witherspoon JR (1982) Molded unit for positive pressure
extraction of ratoon stunting disease bacteria. Sugarcane
Pathologists’ Newsletter 28, 33–34.
Croft BJ, Teakle DS, Leaman TM (1993) Serological diagnostic tests
for ratoon stunting disease in sugarcane. Instruction Manual
MN93001.
Davis MJ, Dean JL (1984) Comparison of diagnostic techniques for
determining incidence of ratoon stunting disease of sugarcane in
Florida. Plant Disease 68, 896–899.
Davis MJ, Dean JL, Harrison NA (1988a) Distribution of Clavibacter
xyli subsp. xyli in stalks of sugarcane cultivars differing in resistance
to ratoon stunting disease. Plant Disease 72, 443–448.
Liefsonia xyli-like bacteria in grasses
151
Davis MJ, Dean JL, Harrison NA (1988b) Quantitative variability of
Clavibacter xyli subsp. xyli populations in sugarcane cultivars
differing in resistance to ratoon stunting disease. Phytopathology
78, 462–468.
Davis MJ, Lawson RH, Gillaspie AG, Harris RW (1983) Properties and
relationships of two xylem-limited bacteria and a mycoplasmalike
organism infecting bermuda grass. Phytopathology 73, 341–346.
Davis MJ, Gillaspie AG, Vidaver AK, Harris RW (1984) Clavibacter :
a new genus containing phytopathogenic coryneform bacteria,
including Clavibacter xyli subsp. xyli sp. nov. and Clavibacter xyli
subsp. cynodontis subsp. nov., pathogens that cause ratoon stunting
disease of sugarcane and bermudagrass stunting disease.
International Journal of Systematic Bacteriology 34, 107–117.
Dominiak BC, Sinnamon LR, Jones CD, Taylor PWJ (1992) RSD
control in Bingera mill area and problems encountered.
Proceedings of Australian Sugar Cane Technologists pp. 37–42.
Evtushenko LI, Dorofeeva LV, Subbotin SA, Cole JR, Tiedje JM (2000)
Leifsonia poae gen. nov., sp. nov., isolated from nematode galls on
Poa annua, and reclassification of 'Corynebacterium aquaticum'
(Leifson 1962) as Leifsonia aquatica (ex Leifson 1962) gen. nov.,
nom. rev., comb. nov. and Clavibacter xyli (Davis et al. 1984) with
two subspecies as Leifsonia xyli gen. nov., comb. nov. International
Journal of Systematic and Evolutionary Microbiology 50, 371–380.
Fegan M, Croft BJ, Teakle DS, Hayward AC, Smith GR. (1998)
Sensitive and specific detection of Clavibacter xyli subsp. xyli,
causal agent of ratoon stunting disease of sugarcane, with a
polymerase chain reaction-based assay. Plant Pathology 47,
495–504.
Gillaspie AG, Teakle DS (1989) Ratoon stunting disease. In ‘Diseases
of sugarcane’, Vol 1. (Eds C. Ricaud, B.T. Egan, A.G. Gillaspie and
C.G. Hughes) pp. 59–80. (Elsevier: Amsterdam)
Hughes CG, Steindl DRL (1955) Ratoon stunting disease of sugarcane.
Queensland Bureau of Sugar Experiment Stations Technical
Communication No. 2.
Koike H, Gillaspie AG, Benda TA (1982) Cane yield response to ratoon
stunting disease. International Sugar Journal 84,131–133.
Liao CH, Chen TA (1981) Isolation, culture and pathogenicity to sudan
grass of a corynebacterium associated with ratoon stunting of
sugarcane and with bermuda grass. Phytopathology 71, 1303–1306.
Matsuoka S (1971) Elephant grass, an indicator plant for ratoon
stunting virus of sugarcane. FAO Plant Protection Bulletin 19,
110–115.
Riley IT, Ophel KM (1992) Clavibacter toxicus sp. nov., the bacterium
responsible for annual ryegrass toxicity in Australia. International
Journal of Systematic Bacteriology 42, 64–68.
Steindl DRL (1957) Host range of the sugarcane ratoon stunting
disease virus. The Journal of the Australian Institute of Agricultural
Science 23, 238.
Steindl DRL (1961) Ratoon stunting disease. In ‘Sugarcane diseases of
the World’. (Eds J.P. Martin, E.V. Abbott, and C.G. Hughes) pp.
433–459. (Elsevier, Amsterdam)
Steindl DRL, Teakle DS (1974) Recent developments in the
identification of ratoon stunting disease. Proceedings of the
Queensland Society of Sugar Cane Technologists 41, 101–104.
Taylor PWJ, Ryan CC, Birch, RG (1988) Harvester transmission of
leaf scald and ratoon stunting disease. Sugar Cane No. 4, pp. 11–14.
Received 12 January 2000, accepted 17 January 2001
http://www.publish.csiro.au/journals/app