Abstract
Recent phylogenetic studies in the Vanguerieae adopted a narrow circumscription for Canthium characterized by the presence of supraaxillary spines. For a continuing project in Philippine Rubiaceae, an important focus was to resolve the disposition of spineless Philippine Canthium. In a collecting trip to key forested sites in the Philippines, two endemic Canthium species were collected: C. monstrosum and C. wenzelii. The absence of spines hinted at a deviation from Canthium sensu stricto (s.s.) and thus raised questions on their generic affiliation. Phylogenetic analysis of the combined ITS-trnL-F data sets showed a well-supported clade of Vanguerieae (PP = 1.00; BS = 100 %). The two endemic Canthium species seemed to have close affinity with Keetia (PP = 0.79; BS = 69 %), within a supported clade (PP = 0.99; BS = 80 %) containing Afrocanthium. Although the C. monstrosum–C. wenzelii-Keetia clade showed low BS support, it appears that morphological attributes shared by these taxa support this relationship. However, the Philippine endemics are morphologically distinct from Keetia by having a shorter calyx limb than the calyx tube, strictly pentamerous corolla, style ± same length with the corolla tube, wider than long stylar knob, glabrous disc, ellipsoid fruit and several features of pyrene such as strictly woody, an angular ventral side, presence of a longitudinal slit within the crest and the absence of a defined lid. To maintain homogeneity, taxonomic stability and distinct geographical distributions we proposed a new Philippine endemic genus Kanapia.
Similar content being viewed by others
References
Akaike H (1974) A new look at the statistical model identification. IEEE Trans Autom Control 19:716–723
Alejandro GJD (2007) The current status of the Philippine Rubiaceae. Philipp J Syst Biol 1(1):47–60
Alejandro GJD, Razafimandimbison SG, Liede-Schumann S (2005) Polyphyly of Mussaenda inferred from ITS and trnT-F data and its implication for generic limits in Mussaendeae (Rubiaceae). Amer J Bot 92:128–141
Alejandro GJD, Meve U, Mouly A, Thiv M, Liede-Schumann S (2011) Molecular phylogeny and taxonomic revision of the Philippine endemic Villaria Rolfe (Rubiaceae). Pl Syst Evol 296:1–20
Alejandro GJD, Arenas EZ, Cremen CM, Arriola AH (2013) A new record of Pyrostria (Vanguerieae-Rubiaceae) from the Philippines inferred from molecular and morphological data. Philipp J Syst Biol 7:1–12
Alejandro GJD, Magdaleno CMM, Pacia JAT, Paraguison LD, Quiogue KKC, Wong AED, Yayen KMR, Arriola AH (2014) Generic affiliation of Canthium species placed under Pyrostria group B sensu Bridson (Vanguerieae, Rubiaceae) inferred from morphology and molecular data. Bot Stud 55:1–8
Altekar G, Dwarkadas S, Heulsenbeck JP, Ronquist F (2004) Parallel metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference. Bioinformatics 20:407–415
Andreasen K, Baldwin BG, Bremer B (1999) Phylogenetic utility of the nuclear rDNA ITS region in subfamily Ixoroideae (Rubiaceae): comparisons with cpDNA rbcL sequence data. Pl Syst Evol 217:119–135
Baldwin B (1992) Phylogenetic utility of the internal transcribed spacer of nuclear ribosomal DNA in plants: an example from the Compositae. Molec Phylogen Evol 1:3–16
Baldwin BG, Sanderson MJ, Porter JM, Wojciechowski MF, Campbell CS, Donoghue MJ (1995) The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny. Ann Missouri Bot Gard 82:247–277
Bridson DM (1985) The reinstatement of Psydrax (Rubiaceae, subfam. Cinchonoideae tribe Vanguerieae) and a revision of the African species. Kew Bull 40:687–725
Bridson DM (1986) The reinstatement of the African genus Keetia (Rubiaceae subfam. Cinchonoideae, tribe Vanguerieae). Kew Bull 41:965–994
Bridson DM (1987) Studies in African Rubiaceae-Vanguerieae: a new circumscription of Pyrostria and a new subgenus. Canthium subgen Bullockia. Kew Bull 42:611–639
Bridson DM (1992) The genus Canthium (Rubiaceae-Vanguerieae) in tropical Africa. Kew Bull 47:353–401
Chase MW, Hills HH (1991) Silica gel: an ideal material for preservation of leaf samples for DNA studies. Taxon 40:215–220
Davis AP, Chester M, Maurin O, Fay M (2007) Searching for the relatives of Coffea (Rubiaceae, Ixoroideae): the circumscription and phylogeny of Coffeeae based on plastid sequence data and morphology. Amer J Bot 94:313–329
Davis AP, Govaerts R, Bridson DM, Ruhsam M, Moat J, Brummitt NA (2009) A global assessment of distribution, diversity, endemism, and taxonomic effort in the Rubiaceae. Ann Missouri Bot Gard 96:68–78
Farris JS (1989) The retention index and the rescaled consistency index. Cladistics 5:417–419
Greoninckx I, Dessein S, Ochoterena H, Persson C, Motley TJ, Kårehed J, Bremer B, Huysmans S, Smets E (2009) Phylogeny of the herbaceous tribe Spermacoceae (Rubiaceae) based on plastid DNA data. Ann Missouri Bot Gard 96:109–132
Huelsenbeck JP, Ronquist F (2001) MRBAYES: bayesian inference of phylogenetic trees. Bioinformatics 8:754–755
Kluge A, Farris JS (1969) Quantitative phyletics and the evolution of the anurans. Syst Zool 18:1–32
Lantz H, Bremer B (2004) Phylogeny inferred from morphology and DNA data: characterizing well-supported groups in Vanguerieae (Rubiaceae). Bot J Linn Soc 146:257–283
Lantz H, Bremer B (2005) Phylogeny of the complex Vanguerieae (Rubiaceae) genera Fagodia, Rytigymia, and Vangueria with close relatives and a new circumsumption of Vanguerieae. Pl Syst Evol 253:159–183
Lantz H, Andreasen K, Bremer B (2002) Nuclear rDNA ITS sequence data used to construct the first phylogeny of Vanguerieae (Rubiaceae). Pl Syst Evol 230:173–187
Lens F, Jansen S, Robbrecht E, Smets E (2000) Wood anatomy of the Vanguerieae (Ixoroideae–Rubiaceae), with special emphasis on some geofructices. IAWA J 21(4):443–455
Maurin O, Davis AP, Chester M, Mvungi EF, Jaufeerally-Fakim Y, Fay MF (2007) Towards a phylogeny for Coffea (Rubiaceae): identifying well-supported lineages based on nuclear and plastid DNA sequences. Ann Bot (Oxford) 100:1565–1583
Merrill ED (1928) Rubiaceae: genus Canthium Lamarck. Philipp J Sci 35:7–9
Popp M, Oxelman B (2001) Inferring the history of the polyploid Siline aeganea (Caryophyllaceae) using plastid and homeologous nuclear DNA sequences. Molec Phylogen Evol 20:474–481
Rambaut A (1996) Se-Al v1.0a1. Available at: http://tree.bio.ed.ac.uk/software/seal/. Accessed 15 May 2011
Razafimandimbison SG, Lantz H, Mouly A, Bremer B (2009) Evolutionary trends, major lineages and new generic limits in the dioecious group of the tribe Vanguerieae (Rubiaceae): insights into the evolution of functional dioecy. Ann Missouri Bot Gard 96:161–181
Robbrecht E (1988) Tropical woody Rubiaceae. Opera Bot Belg 1:1–271
Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574
Schwartz G (1978) Estimating the dimensions of a model. Ann Stat 6:461–464
Soltis DE, Soltis PE (1998) Choosing an approach and an appropriate gene for phylogenetic analysis. In: Soltis DE, Soltis PE, Doyle JJ (eds) Molecular systematics of plants II: DNA Sequencing. Kluwer Academic Publishers, New York
Swofford DL (2002) PAUP* phylogenetic analysis using parsimony (*and other methods), vol 4. Sinauer Associates, Sunderland
Taberlet P, Gielly L, Pautou G, Bouvet J (1991) Universal primers for amplication of three non-coding regions of chloroplast DNA. Pl Molec Biol 17:1105–1109
Tosh J, Davis AP, Dessein S, De Block P, Huysmans S, Fay MF, Smets E, Robbrecht E (2009) Phylogeny of Tricalysia (Rubiaceae) and its relationships with allied genera based on plastid DNA data: resurrection of the genus Empogona. Ann Missouri Bot Gard 96:194–213
Verdcourt B (1987) Notes on African Rubiaceae: Vanguerieae. Kew Bull 42:123–199
Acknowledgments
The authors wish to thank the following herbaria for providing access to collections: L, P, PNH, and USTH. We are also grateful to the anonymous reviewers for comments and suggestions. The authors thank Dr. Arnaud Mouly for his insights and suggestions; we thank the Research Center for Natural and Applied Sciences, University Santo Tomas for the utilization of facilities for molecular work. This project was funded by Commission on Higher Education (CHED) Thesis grant and CHED-PHERNet to AHA and GJDA, respectively.
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Conflict of interest
The authors declare that they have no conflict of interest.
Additional information
Handling editor: Louis P. Ronse De Craene.
Electronic supplementary material
Below is the link to the electronic supplementary material.
Information on Electronic Supplementary Material
Information on Electronic Supplementary Material
Online Resource 1. Alignment of ITS sequences.
Online Resource 2. Alignment of trnL-F region.
Rights and permissions
About this article
Cite this article
Arriola, A.H., Paraguison, L.D. & Alejandro, G.J.D. Kanapia (Vanguerieae): a new endemic genus of Philippine Rubiaceae. Plant Syst Evol 302, 911–920 (2016). https://doi.org/10.1007/s00606-016-1307-5
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00606-016-1307-5